Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_07095 | Not Available | Positive | 1767433 - 1767687 | 9954.58 |
| glycoside hydrolase | DWY53_07100 | Not Available | Negative | 1767782 - 1769716 | 73006.0 |
| duf4981 domain-containing protein | DWY53_07105 | Not Available | Negative | 1769734 - 1772910 | 121403.0 |
| lysine exporter lyso family protein | DWY53_07110 | Not Available | Negative | 1772924 - 1773526 | 21649.9 |
| duf340 domain-containing protein | DWY53_07115 | Not Available | Negative | 1773523 - 1773804 | 10217.2 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_07120 | Not Available | Negative | 1773919 - 1775436 | 57946.4 |
| tonb-dependent receptor | DWY53_07125 | Not Available | Negative | 1775457 - 1778585 | 116548.0 |
| tetratricopeptide repeat protein | DWY53_07130 | Not Available | Negative | 1778809 - 1780434 | 63051.9 |
| ribonuclease hii | DWY53_07135 | Not Available | Positive | 1780536 - 1781141 | 22930.4 |
| l-fucose:h+ symporter permease | DWY53_07140 | Not Available | Negative | 1781284 - 1782597 | 48381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

