Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimp | DWY53_07045 | Not Available | Positive | 1756614 - 1757081 | 17915.3 |
| transcription termination/antitermination protein nusa | DWY53_07050 | Not Available | Positive | 1757084 - 1758340 | 47697.0 |
| translation initiation factor if-2 | DWY53_07055 | Not Available | Positive | 1758382 - 1761393 | 111143.0 |
| cvpa family protein | DWY53_07060 | Not Available | Positive | 1761532 - 1762035 | 18078.1 |
| fe-s cluster assembly protein sufb | DWY53_07065 | Not Available | Positive | 1762043 - 1763494 | 54039.0 |
| fe-s cluster assembly atpase sufc | DWY53_07070 | Not Available | Positive | 1763522 - 1764274 | 27654.6 |
| fe-s cluster assembly protein sufd | DWY53_07075 | Not Available | Positive | 1764304 - 1765647 | 50473.4 |
| cysteine desulfurase | DWY53_07080 | Not Available | Positive | 1765654 - 1766868 | 45098.1 |
| hypothetical protein | DWY53_07085 | Not Available | Negative | 1766944 - 1767150 | 7892.31 |
| hypothetical protein | DWY53_07090 | Not Available | Positive | 1767050 - 1767376 | 12234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

