Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DWY53_06895 | Not Available | Negative | 1726142 - 1727041 | 33701.4 |
| conjugal transfer protein trao | DWY53_06900 | Not Available | Negative | 1727050 - 1727544 | 18028.4 |
| hypothetical protein | DWY53_06905 | Not Available | Negative | 1727809 - 1728117 | 12084.6 |
| hypothetical protein | DWY53_06910 | Not Available | Negative | 1728060 - 1728788 | 28522.1 |
| hypothetical protein | DWY53_06915 | Not Available | Positive | 1728814 - 1729257 | 17109.1 |
| duf4491 family protein | DWY53_06920 | Not Available | Negative | 1729457 - 1729771 | 12155.1 |
| asnc family transcriptional regulator | DWY53_06925 | Not Available | Negative | 1729778 - 1730236 | 17087.9 |
| hypothetical protein | DWY53_06930 | Not Available | Negative | 1730353 - 1730736 | 15190.0 |
| hlyc/corc family transporter | DWY53_06935 | Not Available | Negative | 1730759 - 1732045 | 48001.9 |
| nudix domain-containing protein | DWY53_06940 | Not Available | Positive | 1732180 - 1732704 | 19815.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

