Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_06840 | Not Available | Positive | 1721374 - 1721589 | 8116.46 |
| hypothetical protein | DWY53_06845 | Not Available | Positive | 1721601 - 1721822 | 8927.74 |
| pcfk-like protein | DWY53_06850 | Not Available | Positive | 1721846 - 1722265 | 16155.0 |
| pcfj-like protein | DWY53_06855 | Not Available | Positive | 1722262 - 1723527 | 48776.0 |
| hypothetical protein | DWY53_06860 | Not Available | Positive | 1723552 - 1723809 | 10367.5 |
| duf3873 domain-containing protein | DWY53_06865 | Not Available | Positive | 1723841 - 1724059 | 8460.93 |
| hypothetical protein | DWY53_06870 | Not Available | Positive | 1723999 - 1724304 | 11151.9 |
| hypothetical protein | DWY53_06875 | Not Available | Positive | 1724358 - 1724666 | 11835.4 |
| hypothetical protein | DWY53_06880 | Not Available | Positive | 1724783 - 1725004 | 8090.73 |
| lysozyme | DWY53_06885 | Not Available | Negative | 1725067 - 1725594 | 20311.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

