Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | DWY53_06775 | Not Available | Negative | 1707368 - 1708675 | 49535.8 |
| serine protease | DWY53_06780 | Not Available | Negative | 1708675 - 1710048 | 49946.9 |
| mate family efflux transporter | DWY53_06785 | Not Available | Positive | 1710170 - 1711540 | 49490.1 |
| cytidylate kinase-like family protein | DWY53_06790 | Not Available | Positive | 1711594 - 1712223 | 23564.2 |
| tetratricopeptide repeat protein | DWY53_06795 | Not Available | Positive | 1712453 - 1714309 | 72895.5 |
| duf3244 domain-containing protein | DWY53_06800 | Not Available | Positive | 1714468 - 1714872 | 14848.9 |
| peptidase c39 | DWY53_06810 | Not Available | Positive | 1716065 - 1716652 | 23231.6 |
| tonb-dependent receptor | DWY53_06815 | Not Available | Negative | 1716671 - 1718977 | 87052.3 |
| hypothetical protein | DWY53_06825 | Not Available | Positive | 1720135 - 1720314 | 6531.03 |
| molybdenum abc transporter atp-binding protein | DWY53_06835 | Not Available | Positive | 1721031 - 1721366 | 12959.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

