Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | DWY53_06675 | Not Available | Negative | 1684459 - 1687416 | 112937.0 |
| nadp-specific glutamate dehydrogenase | DWY53_06680 | Not Available | Positive | 1687651 - 1688988 | 48494.3 |
| hypothetical protein | DWY53_06685 | Not Available | Positive | 1689150 - 1689545 | 15230.1 |
| duf3440 domain-containing protein | DWY53_06690 | Not Available | Positive | 1689535 - 1690836 | 52313.9 |
| chromosome partitioning protein parb | DWY53_06695 | Not Available | Positive | 1690833 - 1691345 | 19744.9 |
| hypothetical protein | DWY53_06700 | Not Available | Positive | 1691373 - 1693157 | 65156.6 |
| malate dehydrogenase | DWY53_06705 | Not Available | Negative | 1693255 - 1694196 | 32849.0 |
| hypothetical protein | DWY53_06710 | Not Available | Positive | 1694353 - 1695225 | 33451.4 |
| tolc family protein | DWY53_06715 | Not Available | Positive | 1695441 - 1696904 | 53453.8 |
| biotin/lipoyl-binding protein | DWY53_06720 | Not Available | Positive | 1696931 - 1697917 | 35945.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

