Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWY53_06575 | Not Available | Negative | 1650626 - 1651648 | 37703.0 |
| tolc family protein | DWY53_06580 | Not Available | Negative | 1651672 - 1652997 | 49635.6 |
| tetr/acrr family transcriptional regulator | DWY53_06585 | Not Available | Negative | 1653034 - 1653687 | 25440.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWY53_06590 | Not Available | Negative | 1653717 - 1654484 | 27537.9 |
| tolc family protein | DWY53_06595 | Not Available | Negative | 1654508 - 1655893 | 50365.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWY53_06600 | Not Available | Negative | 1655905 - 1659123 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_06605 | Not Available | Negative | 1659177 - 1660388 | 43695.5 |
| hypothetical protein | DWY53_06610 | Not Available | Negative | 1661347 - 1663662 | 89059.5 |
| hypothetical protein | DWY53_06615 | Not Available | Negative | 1663643 - 1667458 | 144994.0 |
| serine/threonine protein phosphatase | DWY53_06620 | Not Available | Negative | 1667465 - 1668523 | 40418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

