Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_00420 | Not Available | Negative | 98192 - 99070 | 34455.9 |
| hypothetical protein | DWY53_00425 | Not Available | Negative | 99074 - 100243 | 45369.6 |
| site-specific integrase | DWY53_00430 | Not Available | Negative | 100470 - 101690 | 47817.6 |
| Trna-lys | Not Available | Not Available | Positive | 101934 - 102006 | Not Available |
| linear amide c-n hydrolase | DWY53_00440 | Not Available | Negative | 102178 - 103257 | 39662.6 |
| hypothetical protein | DWY53_00445 | Not Available | Negative | 103471 - 105702 | 85680.7 |
| sialate o-acetylesterase | DWY53_00450 | Not Available | Negative | 105715 - 107139 | 53405.0 |
| dna-binding protein | DWY53_00455 | Not Available | Negative | 107157 - 110387 | 121396.0 |
| glycoside hydrolase family 2 | DWY53_00460 | Not Available | Negative | 110535 - 113375 | 106082.0 |
| duf4981 domain-containing protein | DWY53_00465 | Not Available | Negative | 113460 - 116630 | 121131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

