Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4280 domain-containing protein | DWY53_06470 | Not Available | Positive | 1623727 - 1624947 | 43581.8 |
| hypothetical protein | DWY53_06475 | Not Available | Positive | 1624937 - 1625842 | 34737.1 |
| mobilization protein | DWY53_06480 | Not Available | Negative | 1625973 - 1627439 | 56823.7 |
| hypothetical protein | DWY53_06485 | Not Available | Negative | 1627746 - 1628858 | 42156.4 |
| helicase | DWY53_06490 | Not Available | Negative | 1629296 - 1630426 | 42095.3 |
| helix-turn-helix domain-containing protein | DWY53_06495 | Not Available | Negative | 1630432 - 1630806 | 14153.8 |
| transposase | DWY53_06500 | Not Available | Negative | 1631004 - 1631825 | 32410.9 |
| site-specific integrase | DWY53_06505 | Not Available | Negative | 1632084 - 1633202 | 43560.9 |
| dna-binding protein | DWY53_06510 | Not Available | Negative | 1633336 - 1634277 | 36410.2 |
| helix-turn-helix domain-containing protein | DWY53_06515 | Not Available | Positive | 1634593 - 1635513 | 35987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

