Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_06365 | Not Available | Positive | 1601479 - 1602039 | 21343.8 |
| ahpc/tsa family protein | DWY53_06370 | Not Available | Negative | 1602139 - 1603134 | 37138.8 |
| duf4091 domain-containing protein | DWY53_06375 | Not Available | Positive | 1603268 - 1605016 | 66454.4 |
| duf2149 domain-containing protein | DWY53_06380 | Not Available | Negative | 1605332 - 1605661 | 12445.0 |
| mota/tolq/exbb proton channel family protein | DWY53_06385 | Not Available | Negative | 1605663 - 1606262 | 22092.6 |
| hypothetical protein | DWY53_06390 | Not Available | Negative | 1606277 - 1606966 | 25151.1 |
| cobaltochelatase subunit cobn | DWY53_06395 | Not Available | Negative | 1606973 - 1611448 | 166055.0 |
| tonb-dependent receptor | DWY53_06400 | Not Available | Negative | 1611495 - 1613651 | 81336.9 |
| hypothetical protein | DWY53_06405 | Not Available | Negative | 1613665 - 1614327 | 24780.3 |
| hypothetical protein | DWY53_06410 | Not Available | Negative | 1614329 - 1614796 | 16027.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

