Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | DWY53_06205 | Not Available | Negative | 1547030 - 1548673 | 60471.7 |
| coce/nond family hydrolase | DWY53_06210 | Not Available | Positive | 1548812 - 1550719 | 73940.9 |
| duf4954 family protein | DWY53_06215 | Not Available | Negative | 1550867 - 1552852 | 74505.4 |
| gtpase hflx | DWY53_06220 | Not Available | Negative | 1552866 - 1554119 | 47657.5 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_06225 | Not Available | Negative | 1554238 - 1555827 | 61771.0 |
| tonb-dependent receptor | DWY53_06230 | Not Available | Negative | 1555849 - 1558848 | 112088.0 |
| hybrid sensor histidine kinase/response regulator | DWY53_06235 | Not Available | Negative | 1559164 - 1563114 | 152165.0 |
| galactose mutarotase | DWY53_06240 | Not Available | Negative | 1563297 - 1564430 | 42509.3 |
| ahpc/tsa family protein | DWY53_06250 | Not Available | Negative | 1566868 - 1568046 | 44934.1 |
| tlpa family protein disulfide reductase | DWY53_06255 | Not Available | Negative | 1568054 - 1569421 | 51271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

