Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DWY53_06155 | Not Available | Negative | 1531930 - 1532448 | 19395.3 |
| aaa family atpase | DWY53_06160 | Not Available | Negative | 1532851 - 1534431 | 61277.0 |
| ribosome-recycling factor | DWY53_06165 | Not Available | Positive | 1534670 - 1535230 | 20738.2 |
| ribosome small subunit-dependent gtpase a | DWY53_06170 | Not Available | Positive | 1535351 - 1536283 | 35098.8 |
| m20/m25/m40 family metallo-hydrolase | DWY53_06175 | Not Available | Positive | 1536297 - 1537316 | 38379.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_06180 | Not Available | Positive | 1537403 - 1538479 | 39685.1 |
| acrb/acrd/acrf family protein | DWY53_06185 | Not Available | Positive | 1538499 - 1541534 | 112053.0 |
| tolc family protein | DWY53_06190 | Not Available | Positive | 1541531 - 1542850 | 50562.7 |
| amino acid permease | DWY53_06195 | Not Available | Positive | 1542939 - 1544597 | 59786.5 |
| alpha-n-acetylglucosaminidase | DWY53_06200 | Not Available | Negative | 1544771 - 1546927 | 82746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

