Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_06105 | Not Available | Negative | 1519498 - 1519731 | 9401.63 |
| yran family protein | DWY53_06110 | Not Available | Positive | 1519807 - 1520172 | 14153.8 |
| mmcq/yjbr family dna-binding protein | DWY53_06115 | Not Available | Positive | 1520190 - 1520546 | 13937.7 |
| biotin--[acetyl-coa-carboxylase] ligase | DWY53_06120 | Not Available | Positive | 1520530 - 1521297 | 29257.9 |
| peptidase s41 | DWY53_06125 | Not Available | Negative | 1521294 - 1522733 | 54106.5 |
| mate family efflux transporter | DWY53_06130 | Not Available | Positive | 1522892 - 1524217 | 48953.7 |
| ump kinase | DWY53_06135 | Not Available | Positive | 1524256 - 1524966 | 25575.2 |
| glycoside hydrolase family 88 protein | DWY53_06140 | Not Available | Positive | 1525224 - 1526462 | 47188.2 |
| hypothetical protein | DWY53_06145 | Not Available | Positive | 1526517 - 1528625 | 79918.1 |
| duf4450 domain-containing protein | DWY53_06150 | Not Available | Positive | 1528650 - 1531907 | 121597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

