Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DWY53_06055 | Not Available | Positive | 1510017 - 1510445 | 16199.1 |
| hypothetical protein | DWY53_06060 | Not Available | Positive | 1510507 - 1510728 | 8312.45 |
| plasmid pria4b orf-3 family protein | DWY53_06065 | Not Available | Negative | 1510843 - 1512402 | 61127.4 |
| hypothetical protein | DWY53_06070 | Not Available | Negative | 1512582 - 1512917 | 12878.8 |
| thioredoxin | DWY53_06075 | Not Available | Negative | 1512953 - 1513267 | 11454.8 |
| dna polymerase iii subunit alpha | DWY53_06080 | Not Available | Negative | 1513309 - 1517106 | 143977.0 |
| phosphatidylserine decarboxylase proenzyme | DWY53_06085 | Not Available | Positive | 1517298 - 1517984 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DWY53_06090 | Not Available | Positive | 1517996 - 1518703 | 26073.4 |
| duf4834 family protein | DWY53_06095 | Not Available | Positive | 1518756 - 1519058 | 11555.5 |
| nucleoside deaminase | DWY53_06100 | Not Available | Negative | 1519062 - 1519496 | 15697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

