Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DWY53_00370 | Not Available | Positive | 91106 - 91966 | 32172.9 |
| duf3872 domain-containing protein | DWY53_00375 | Not Available | Positive | 91963 - 92466 | 19085.4 |
| hypothetical protein | DWY53_00380 | Not Available | Negative | 92643 - 92810 | 6430.67 |
| is66-like element isbf10 family transposase | DWY53_00385 | Not Available | Negative | 92886 - 94559 | 65055.0 |
| is66 family insertion sequence hypothetical protein | DWY53_00390 | Not Available | Negative | 94635 - 95000 | 14167.3 |
| is66 family insertion sequence hypothetical protein | DWY53_00395 | Not Available | Negative | 95004 - 95360 | 13413.2 |
| duf4120 domain-containing protein | DWY53_00400 | Not Available | Negative | 95663 - 95956 | 11397.3 |
| hypothetical protein | DWY53_00405 | Not Available | Negative | 95990 - 96967 | 38311.5 |
| hypothetical protein | DWY53_00410 | Not Available | Negative | 96986 - 97330 | 13253.0 |
| duf4313 domain-containing protein | DWY53_00415 | Not Available | Negative | 97517 - 98170 | 25263.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

