Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | DWY53_05955 | Not Available | Negative | 1487704 - 1488051 | 13742.9 |
| m23 family peptidase | DWY53_05960 | Not Available | Negative | 1488085 - 1489053 | 36405.9 |
| alanine--trna ligase | DWY53_05965 | Not Available | Positive | 1489193 - 1491811 | 97398.6 |
| duf2075 domain-containing protein | DWY53_05970 | Not Available | Negative | 1492133 - 1493551 | 53982.7 |
| hypothetical protein | DWY53_05975 | Not Available | Positive | 1493649 - 1494335 | 25516.8 |
| duf3822 family protein | DWY53_05980 | Not Available | Positive | 1494338 - 1495162 | 32357.8 |
| methyltransferase domain-containing protein | DWY53_05985 | Not Available | Positive | 1495153 - 1495713 | 21359.3 |
| cardiolipin synthase | DWY53_05990 | Not Available | Negative | 1495682 - 1497118 | 55394.1 |
| tonb-dependent receptor | DWY53_05995 | Not Available | Negative | 1497211 - 1500108 | 108064.0 |
| hypothetical protein | DWY53_06000 | Not Available | Negative | 1500189 - 1500593 | 15580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

