Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4422 domain-containing protein | DWY53_05700 | Not Available | Positive | 1434213 - 1435037 | 32672.3 |
| glycosyltransferase | DWY53_05705 | Not Available | Positive | 1435041 - 1435988 | 36866.2 |
| glycosyltransferase | DWY53_05710 | Not Available | Negative | 1436006 - 1436821 | 31373.7 |
| glycosyl transferase | DWY53_05715 | Not Available | Negative | 1436842 - 1437759 | 35816.1 |
| abc transporter atp-binding protein | DWY53_05720 | Not Available | Negative | 1437775 - 1439046 | 46702.5 |
| abc transporter permease | DWY53_05725 | Not Available | Negative | 1439060 - 1439923 | 33233.7 |
| glycosyltransferase family 4 protein | DWY53_05730 | Not Available | Negative | 1439910 - 1441091 | 44851.2 |
| glycosyltransferase family 2 protein | DWY53_05735 | Not Available | Positive | 1441704 - 1442654 | 37137.1 |
| glycosyltransferase | DWY53_05740 | Not Available | Negative | 1442675 - 1443700 | 40588.0 |
| hypothetical protein | DWY53_05745 | Not Available | Negative | 1443775 - 1443957 | 7023.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

