Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | DWY53_05650 | Not Available | Negative | 1423283 - 1424017 | 28586.5 |
| response regulator | DWY53_05655 | Not Available | Positive | 1424373 - 1424738 | 14101.4 |
| sugar transferase | DWY53_05660 | Not Available | Positive | 1424745 - 1425920 | 44987.8 |
| hypothetical protein | DWY53_05665 | Not Available | Positive | 1425957 - 1426820 | 32645.0 |
| hypothetical protein | DWY53_05670 | Not Available | Positive | 1426826 - 1428973 | 82522.6 |
| o-antigen ligase domain-containing protein | DWY53_05675 | Not Available | Positive | 1428977 - 1430437 | 54872.9 |
| glycosyltransferase family 2 protein | DWY53_05680 | Not Available | Positive | 1430418 - 1431323 | 34487.7 |
| glycosyltransferase | DWY53_05685 | Not Available | Positive | 1431320 - 1432444 | 43036.3 |
| glycosyltransferase family 2 protein | DWY53_05690 | Not Available | Positive | 1432452 - 1433612 | 44269.4 |
| acyltransferase | DWY53_05695 | Not Available | Positive | 1433617 - 1434228 | 23079.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

