Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | DWY53_05550 | Not Available | Negative | 1397032 - 1399605 | 99213.8 |
| phosphate transport system regulatory protein phou | DWY53_05555 | Not Available | Negative | 1400007 - 1400708 | 26659.2 |
| phosphate abc transporter atp-binding protein | DWY53_05560 | Not Available | Negative | 1400912 - 1401664 | 28126.9 |
| phosphate abc transporter permease ptsa | DWY53_05565 | Not Available | Negative | 1401762 - 1402649 | 32038.4 |
| phosphate abc transporter permease subunit pstc | DWY53_05570 | Not Available | Negative | 1402747 - 1403934 | 42792.7 |
| phosphate abc transporter substrate-binding protein psts family protein | DWY53_05575 | Not Available | Positive | 1404202 - 1405020 | 29953.4 |
| glutamine--trna ligase/yqey domain fusion protein | DWY53_05580 | Not Available | Positive | 1405078 - 1406817 | 66936.0 |
| tetratricopeptide repeat protein | DWY53_05585 | Not Available | Positive | 1406828 - 1408345 | 59232.0 |
| deda family protein | DWY53_05590 | Not Available | Positive | 1408353 - 1408979 | 23001.3 |
| thiol peroxidase | DWY53_05595 | Not Available | Positive | 1409048 - 1409551 | 17976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

