Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein | DWY53_05500 | Not Available | Negative | 1387133 - 1388278 | 44582.8 |
| f420h(2):quinone oxidoreductase | DWY53_05505 | Not Available | Negative | 1388254 - 1389477 | 46759.9 |
| lipopolysaccharide biosynthesis protein | DWY53_05510 | Not Available | Negative | 1389480 - 1391018 | 57963.3 |
| hypothetical protein | DWY53_05515 | Not Available | Negative | 1391066 - 1392115 | 41117.1 |
| hypothetical protein | DWY53_05520 | Not Available | Negative | 1392762 - 1392944 | 7484.05 |
| hypothetical protein | DWY53_05525 | Not Available | Negative | 1393057 - 1393305 | 9345.85 |
| transcriptional regulator | DWY53_05530 | Not Available | Negative | 1393427 - 1394524 | 42333.0 |
| hypothetical protein | DWY53_05535 | Not Available | Negative | 1394855 - 1395049 | 7470.88 |
| duf4435 domain-containing protein | DWY53_05540 | Not Available | Negative | 1395249 - 1396133 | 34468.2 |
| atp-binding cassette domain-containing protein | DWY53_05545 | Not Available | Negative | 1396133 - 1396927 | 30548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

