Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DWY53_00315 | Not Available | Positive | 82331 - 84145 | 71196.1 |
| hypothetical protein | DWY53_00325 | Not Available | Positive | 84696 - 85319 | 24484.3 |
| duf3876 domain-containing protein | DWY53_00330 | Not Available | Positive | 85363 - 85728 | 13698.4 |
| duf4141 domain-containing protein | DWY53_00335 | Not Available | Positive | 85725 - 86354 | 23963.7 |
| conjugative transposon protein traj | DWY53_00340 | Not Available | Positive | 86358 - 87371 | 37561.0 |
| conjugative transposon protein trak | DWY53_00345 | Not Available | Positive | 87404 - 88027 | 24104.7 |
| hypothetical protein | DWY53_00350 | Not Available | Positive | 88024 - 88341 | 12114.6 |
| conjugative transposon protein tram | DWY53_00355 | Not Available | Positive | 88280 - 89584 | 48648.1 |
| conjugative transposon protein tran | DWY53_00360 | Not Available | Positive | 89631 - 90545 | 35048.3 |
| conjugal transfer protein trao | DWY53_00365 | Not Available | Positive | 90542 - 91099 | 20513.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

