Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system toxin component, pin family | DWY53_05450 | Not Available | Negative | 1378408 - 1378815 | 15740.8 |
| hypothetical protein | DWY53_05455 | Not Available | Negative | 1378829 - 1379044 | 8582.31 |
| hypothetical protein | DWY53_05460 | Not Available | Negative | 1379233 - 1380045 | 30773.5 |
| glycosyltransferase | DWY53_05465 | Not Available | Negative | 1380050 - 1380763 | 27614.7 |
| glycosyltransferase | DWY53_05470 | Not Available | Negative | 1380788 - 1381876 | 41455.1 |
| glycosyltransferase | DWY53_05475 | Not Available | Negative | 1382222 - 1383259 | 40228.2 |
| alpha-1,2-fucosyltransferase | DWY53_05480 | Not Available | Negative | 1383256 - 1384056 | 30674.1 |
| glycosyltransferase family 2 protein | DWY53_05485 | Not Available | Negative | 1384053 - 1385036 | 38533.7 |
| hypothetical protein | DWY53_05490 | Not Available | Negative | 1384996 - 1386180 | 46438.9 |
| glycosyltransferase family 2 protein | DWY53_05495 | Not Available | Negative | 1386177 - 1387136 | 37918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

