Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DWY53_05390 | Not Available | Negative | 1361450 - 1362760 | 48569.2 |
| insulinase family protein | DWY53_05395 | Not Available | Negative | 1362854 - 1364098 | 47349.5 |
| peptidylprolyl isomerase | DWY53_05400 | Not Available | Negative | 1364111 - 1364956 | 31477.6 |
| hypothetical protein | DWY53_05410 | Not Available | Positive | 1365665 - 1370314 | 171857.0 |
| hypothetical protein | DWY53_05415 | Not Available | Positive | 1370311 - 1372668 | 89016.6 |
| nucleotidyltransferase | DWY53_05420 | Not Available | Positive | 1372803 - 1373714 | 33769.1 |
| arac family transcriptional regulator | DWY53_05425 | Not Available | Negative | 1373819 - 1374721 | 35311.8 |
| hypothetical protein | DWY53_05430 | Not Available | Positive | 1374933 - 1375613 | 24715.3 |
| glycoside hydrolase family 37 | DWY53_05435 | Not Available | Positive | 1375775 - 1377157 | 53221.9 |
| hypothetical protein | DWY53_05445 | Not Available | Negative | 1378134 - 1378382 | 9392.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

