Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_05285 | Not Available | Positive | 1331476 - 1333932 | 89689.5 |
| dead/deah box helicase | DWY53_05290 | Not Available | Positive | 1334136 - 1335440 | 48294.5 |
| hypothetical protein | DWY53_05295 | Not Available | Positive | 1335449 - 1335658 | 7904.63 |
| hypothetical protein | DWY53_05305 | Not Available | Positive | 1336244 - 1336453 | 7868.87 |
| duf1566 domain-containing protein | DWY53_05310 | Not Available | Negative | 1336486 - 1338036 | 54947.7 |
| arylsulfatase | DWY53_05315 | Not Available | Negative | 1338318 - 1339916 | 60899.1 |
| glycoside hydrolase family 2 protein | DWY53_05320 | Not Available | Negative | 1340031 - 1342709 | 101296.0 |
| glycoside hydrolase | DWY53_05325 | Not Available | Negative | 1342772 - 1344853 | 80552.9 |
| duf4982 domain-containing protein | DWY53_05330 | Not Available | Negative | 1344850 - 1347297 | 92762.4 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_05335 | Not Available | Negative | 1347396 - 1348937 | 59338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

