Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DWY53_05235 | Not Available | Negative | 1321642 - 1324863 | 119478.0 |
| hypothetical protein | DWY53_05240 | Not Available | Negative | 1325118 - 1325909 | 29912.6 |
| tryptophan--trna ligase | DWY53_05245 | Not Available | Positive | 1326013 - 1327107 | 41376.8 |
| Trna-val | Not Available | Not Available | Positive | 1327324 - 1327398 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1327437 - 1327511 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1327550 - 1327627 | Not Available |
| dna-binding response regulator | DWY53_05265 | Not Available | Positive | 1327696 - 1328346 | 24599.1 |
| trna 2-thiouridine(34) synthase mnma | DWY53_05270 | Not Available | Negative | 1328343 - 1329407 | 39768.7 |
| cysteine synthase a | DWY53_05275 | Not Available | Negative | 1329414 - 1330364 | 33551.6 |
| endonuclease/exonuclease/phosphatase family protein | DWY53_05280 | Not Available | Positive | 1330510 - 1331448 | 34976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

