Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | DWY53_05185 | Not Available | Positive | 1309439 - 1310248 | 30250.0 |
| slc13/dass family transporter | DWY53_05190 | Not Available | Positive | 1310264 - 1311817 | 56645.7 |
| adenylyl-sulfate kinase | DWY53_05195 | Not Available | Positive | 1311847 - 1312461 | 22681.6 |
| sulfate adenylyltransferase subunit cysd | DWY53_05200 | Not Available | Positive | 1312473 - 1313384 | 35794.7 |
| sulfate adenylyltransferase subunit cysn | DWY53_05205 | Not Available | Positive | 1313421 - 1314878 | 54506.5 |
| sulfotransferase | DWY53_05210 | Not Available | Positive | 1314906 - 1316012 | 43290.1 |
| hypothetical protein | DWY53_05215 | Not Available | Negative | 1316090 - 1317289 | 43736.0 |
| peroxide stress protein yaaa | DWY53_05220 | Not Available | Negative | 1317396 - 1318163 | 29374.4 |
| tlpa family protein disulfide reductase | DWY53_05225 | Not Available | Positive | 1318251 - 1318751 | 19123.4 |
| tonb-dependent receptor | DWY53_05230 | Not Available | Positive | 1318772 - 1321576 | 106669.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

