Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DWY53_05130 | Not Available | Positive | 1296110 - 1298206 | 80620.3 |
| hypothetical protein | DWY53_05135 | Not Available | Negative | 1298330 - 1298764 | 17229.6 |
| imp dehydrogenase | DWY53_05145 | Not Available | Positive | 1299016 - 1300491 | 52760.1 |
| peptidylprolyl isomerase | DWY53_05150 | Not Available | Positive | 1300504 - 1301841 | 52178.3 |
| peptidyl-prolyl cis-trans isomerase | DWY53_05155 | Not Available | Positive | 1301878 - 1302750 | 34104.5 |
| peptidylprolyl isomerase | DWY53_05160 | Not Available | Positive | 1302755 - 1304113 | 52289.8 |
| hypothetical protein | DWY53_05165 | Not Available | Positive | 1304131 - 1305798 | 63852.4 |
| hypothetical protein | DWY53_05170 | Not Available | Positive | 1305801 - 1306097 | 11737.6 |
| dna mismatch repair endonuclease mutl | DWY53_05175 | Not Available | Positive | 1306119 - 1307987 | 68716.8 |
| hypothetical protein | DWY53_05180 | Not Available | Positive | 1308216 - 1309424 | 45843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

