Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_00260 | Not Available | Negative | 71446 - 71859 | 16336.8 |
| conjugal transfer protein trag | DWY53_00265 | Not Available | Negative | 72154 - 74190 | 77357.4 |
| mobilization protein | DWY53_00270 | Not Available | Negative | 74253 - 75515 | 48277.1 |
| moba protein | DWY53_00275 | Not Available | Negative | 75500 - 76006 | 19920.3 |
| para family protein | DWY53_00280 | Not Available | Positive | 76663 - 77415 | 28664.7 |
| duf3408 domain-containing protein | DWY53_00285 | Not Available | Positive | 77421 - 77858 | 16733.2 |
| duf3408 domain-containing protein | DWY53_00290 | Not Available | Positive | 77861 - 78235 | 14252.8 |
| duf4122 domain-containing protein | DWY53_00295 | Not Available | Positive | 78223 - 78882 | 25052.5 |
| duf4134 domain-containing protein | DWY53_00300 | Not Available | Positive | 79067 - 79363 | 10312.7 |
| duf4133 domain-containing protein | DWY53_00305 | Not Available | Positive | 79367 - 79690 | 12236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

