Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF25-30LB
Accession NumberQRUD00000000.1
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 2685295 - 2685307 | Not Available |
| Putative translation initiation factor | DWY53_11275 | Not Available | + | 2688109 - 2688891 | 29464.9 |
| Hypothetical protein | DWY53_11280 | Not Available | + | 2688888 - 2689808 | 35189.7 |
| Single stranded dna binding protein | DWY53_11285 | Not Available | + | 2689795 - 2690172 | 14007.7 |
| Putative dna base-flipping protein | DWY53_11290 | Not Available | + | 2690172 - 2690624 | 17341.8 |
| hypothetical protein | DWY53_11295 | Not Available | + | 2690648 - 2691349 | 26802.1 |
| hnh endonuclease | DWY53_11300 | Not Available | + | 2691349 - 2691624 | 10686.2 |
| 1_nc_021788: helicase | DWY53_11305 | Not Available | + | 2691621 - 2692778 | 43764.6 |
| Putative endodeoxyribonuclease | DWY53_11310 | Not Available | + | 2692781 - 2693155 | 14823.0 |
| Recombinase | DWY53_11315 | Not Available | + | 2693167 - 2693517 | 13569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
