Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | DWZ06_05105 | Not Available | Positive | 1194945 - 1196366 | 54029.9 |
| dna packaging protein | DWZ06_05110 | Not Available | Positive | 1196370 - 1196912 | 20861.6 |
| phage portal protein | DWZ06_05115 | Not Available | Positive | 1196914 - 1198230 | 50384.5 |
| hypothetical protein | DWZ06_05120 | Not Available | Positive | 1198227 - 1198763 | 20512.0 |
| hypothetical protein | DWZ06_05125 | Not Available | Positive | 1198760 - 1199224 | 17456.4 |
| hypothetical protein | DWZ06_05130 | Not Available | Positive | 1199208 - 1199690 | 18039.4 |
| hypothetical protein | DWZ06_05135 | Not Available | Positive | 1199668 - 1200759 | 41018.8 |
| hypothetical protein | DWZ06_05140 | Not Available | Positive | 1200756 - 1202684 | 72763.1 |
| hypothetical protein | DWZ06_05145 | Not Available | Positive | 1202689 - 1205331 | 96723.1 |
| hypothetical protein | DWZ06_05150 | Not Available | Positive | 1205328 - 1205564 | 9342.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

