Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWZ06_03980 | Not Available | Positive | 929741 - 930691 | 37209.2 |
| glycosyltransferase | DWZ06_03985 | Not Available | Negative | 930712 - 931737 | 40566.0 |
| hypothetical protein | DWZ06_03990 | Not Available | Negative | 931812 - 931994 | 7023.73 |
| glycosyltransferase family 4 protein | DWZ06_03995 | Not Available | Positive | 931966 - 933111 | 43981.0 |
| glycosyltransferase family 4 protein | DWZ06_04000 | Not Available | Positive | 933108 - 934259 | 44552.9 |
| glycosyltransferase family 1 protein | DWZ06_04005 | Not Available | Positive | 934256 - 935389 | 43433.5 |
| glycosyltransferase family 4 protein | DWZ06_04010 | Not Available | Positive | 935350 - 936549 | 46006.8 |
| sam-dependent methyltransferase | DWZ06_04015 | Not Available | Positive | 936546 - 937328 | 31177.3 |
| glycosyltransferase family 2 protein | DWZ06_04020 | Not Available | Positive | 937312 - 938154 | 32126.5 |
| glycosyltransferase family 1 protein | DWZ06_04025 | Not Available | Positive | 938161 - 939279 | 42816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

