Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWZ06_03930 | Not Available | Positive | 919357 - 920481 | 43036.3 |
| glycosyltransferase family 2 protein | DWZ06_03935 | Not Available | Positive | 920489 - 921649 | 44283.5 |
| acyltransferase | DWZ06_03940 | Not Available | Positive | 921654 - 922265 | 23079.2 |
| duf4422 domain-containing protein | DWZ06_03945 | Not Available | Positive | 922250 - 923074 | 32699.4 |
| glycosyltransferase | DWZ06_03950 | Not Available | Positive | 923078 - 924025 | 36866.2 |
| glycosyltransferase | DWZ06_03955 | Not Available | Negative | 924043 - 924858 | 31315.7 |
| glycosyl transferase | DWZ06_03960 | Not Available | Negative | 924879 - 925796 | 35696.9 |
| abc transporter atp-binding protein | DWZ06_03965 | Not Available | Negative | 925812 - 927083 | 46668.5 |
| abc transporter permease | DWZ06_03970 | Not Available | Negative | 927097 - 927960 | 33261.8 |
| glycosyltransferase family 4 protein | DWZ06_03975 | Not Available | Negative | 927947 - 929128 | 44899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

