Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_03780 | Not Available | Negative | 882937 - 883131 | 7470.88 |
| duf4435 domain-containing protein | DWZ06_03785 | Not Available | Negative | 883331 - 884215 | 34468.2 |
| atp-binding cassette domain-containing protein | DWZ06_03790 | Not Available | Negative | 884215 - 885009 | 30548.0 |
| carboxypeptidase-like regulatory domain-containing protein | DWZ06_03795 | Not Available | Negative | 885114 - 887687 | 99213.8 |
| phosphate transport system regulatory protein phou | DWZ06_03800 | Not Available | Negative | 888089 - 888790 | 26659.2 |
| phosphate abc transporter atp-binding protein | DWZ06_03805 | Not Available | Negative | 888994 - 889746 | 28156.9 |
| phosphate abc transporter permease ptsa | DWZ06_03810 | Not Available | Negative | 889844 - 890731 | 32159.4 |
| phosphate abc transporter permease subunit pstc | DWZ06_03815 | Not Available | Negative | 890828 - 892015 | 42792.7 |
| psts family phosphate abc transporter substrate-binding protein | DWZ06_03820 | Not Available | Positive | 892283 - 893101 | 29967.5 |
| glutamine--trna ligase/yqey domain fusion protein | DWZ06_03825 | Not Available | Positive | 893159 - 894898 | 66876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

