Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DWZ06_03730 | Not Available | Negative | 872135 - 873118 | 38533.7 |
| hypothetical protein | DWZ06_03735 | Not Available | Negative | 873078 - 874262 | 46438.9 |
| glycosyltransferase family 2 protein | DWZ06_03740 | Not Available | Negative | 874259 - 875218 | 37918.2 |
| polysaccharide pyruvyl transferase family protein | DWZ06_03745 | Not Available | Negative | 875215 - 876360 | 44582.8 |
| f420h(2):quinone oxidoreductase | DWZ06_03750 | Not Available | Negative | 876336 - 877559 | 46759.9 |
| lipopolysaccharide biosynthesis protein | DWZ06_03755 | Not Available | Negative | 877562 - 879100 | 57963.3 |
| hypothetical protein | DWZ06_03760 | Not Available | Negative | 879148 - 880197 | 41117.1 |
| hypothetical protein | DWZ06_03765 | Not Available | Negative | 880844 - 881026 | 7484.05 |
| hypothetical protein | DWZ06_03770 | Not Available | Negative | 881139 - 881387 | 9345.85 |
| transcriptional regulator | DWZ06_03775 | Not Available | Negative | 881509 - 882606 | 42362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

