Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_03475 | Not Available | Positive | 818679 - 819059 | 14324.3 |
| hypothetical protein | DWZ06_03480 | Not Available | Positive | 819031 - 819336 | 11612.0 |
| aspartate ammonia-lyase | DWZ06_03485 | Not Available | Negative | 819280 - 820713 | 52225.3 |
| yitt family protein | DWZ06_03490 | Not Available | Negative | 820977 - 821867 | 32573.4 |
| lruc domain-containing protein | DWZ06_03495 | Not Available | Negative | 822008 - 823885 | 71350.9 |
| udp-glucose 4-epimerase gale | DWZ06_03500 | Not Available | Negative | 824179 - 825213 | 37984.7 |
| hypothetical protein | DWZ06_03505 | Not Available | Negative | 825246 - 826142 | 33994.2 |
| electron transport complex subunit rsxa | DWZ06_03510 | Not Available | Negative | 826284 - 826886 | 21298.3 |
| electron transport complex subunit e | DWZ06_03515 | Not Available | Negative | 826905 - 827489 | 20626.5 |
| rnfabcdge type electron transport complex subunit g | DWZ06_03520 | Not Available | Negative | 827504 - 828298 | 27067.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

