Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_03165 | Not Available | Negative | 740044 - 740478 | 17227.5 |
| imp dehydrogenase | DWZ06_03175 | Not Available | Positive | 740730 - 742205 | 52760.1 |
| peptidylprolyl isomerase | DWZ06_03180 | Not Available | Positive | 742218 - 743555 | 52134.3 |
| peptidyl-prolyl cis-trans isomerase | DWZ06_03185 | Not Available | Positive | 743592 - 744464 | 34134.5 |
| peptidylprolyl isomerase | DWZ06_03190 | Not Available | Positive | 744469 - 745827 | 52289.8 |
| hypothetical protein | DWZ06_03195 | Not Available | Positive | 745845 - 747512 | 63852.4 |
| hypothetical protein | DWZ06_03200 | Not Available | Positive | 747515 - 747811 | 11737.6 |
| dna mismatch repair endonuclease mutl | DWZ06_03205 | Not Available | Positive | 747833 - 749701 | 68716.8 |
| hypothetical protein | DWZ06_03210 | Not Available | Positive | 749930 - 751138 | 45833.1 |
| 3'(2'),5'-bisphosphate nucleotidase | DWZ06_03215 | Not Available | Positive | 751153 - 751962 | 30250.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

