Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_03110 | Not Available | Positive | 729519 - 731309 | 67969.1 |
| hypothetical protein | DWZ06_03115 | Not Available | Positive | 731390 - 731677 | 9330.33 |
| hypothetical protein | DWZ06_03120 | Not Available | Positive | 731692 - 731880 | 7003.26 |
| hypothetical protein | DWZ06_03125 | Not Available | Positive | 732195 - 732704 | 18725.3 |
| hypothetical protein | DWZ06_03130 | Not Available | Positive | 732701 - 733270 | 21589.8 |
| hypothetical protein | DWZ06_03135 | Not Available | Positive | 733285 - 733710 | 16751.9 |
| hypothetical protein | DWZ06_03140 | Not Available | Positive | 733929 - 734405 | 17607.2 |
| transglutaminase domain-containing protein | DWZ06_03145 | Not Available | Positive | 734417 - 735925 | 57558.3 |
| hypothetical protein | DWZ06_03155 | Not Available | Positive | 736670 - 737101 | 17103.1 |
| helicase | DWZ06_03160 | Not Available | Positive | 737824 - 739920 | 80699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

