Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 706815 - 706888 | Not Available |
| hypothetical protein | DWZ06_03015 | Not Available | Positive | 710159 - 710377 | 7572.21 |
| duf177 domain-containing protein | DWZ06_03020 | Not Available | Positive | 710671 - 711204 | 19819.5 |
| 50s ribosomal protein l32 | DWZ06_03025 | Not Available | Positive | 711216 - 711401 | 6838.3 |
| ketoacyl-acp synthase iii | DWZ06_03030 | Not Available | Positive | 711506 - 712510 | 36862.4 |
| gtpase era | DWZ06_03035 | Not Available | Positive | 712593 - 713474 | 33673.8 |
| ribosome biogenesis gtpase der | DWZ06_03040 | Not Available | Positive | 713508 - 714821 | 49388.4 |
| abc transporter atp-binding protein | DWZ06_03045 | Not Available | Negative | 714899 - 715663 | 28911.9 |
| abc transporter permease | DWZ06_03050 | Not Available | Negative | 715660 - 716403 | 27369.4 |
| lps export abc transporter atp-binding protein | DWZ06_03055 | Not Available | Positive | 716532 - 717353 | 31018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

