Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | DWZ06_02670 | Not Available | Positive | 636646 - 637419 | 27566.2 |
| hypothetical protein | DWZ06_02675 | Not Available | Positive | 637427 - 637888 | 16678.8 |
| biopolymer transporter exbd | DWZ06_02680 | Not Available | Positive | 637932 - 638522 | 22472.8 |
| biopolymer transporter exbd | DWZ06_02685 | Not Available | Positive | 638522 - 638986 | 17906.9 |
| hypothetical protein | DWZ06_02690 | Not Available | Positive | 639042 - 639257 | 8398.44 |
| gnat family n-acetyltransferase | DWZ06_02695 | Not Available | Negative | 639168 - 639704 | 21209.5 |
| peptidase m64 | DWZ06_02700 | Not Available | Negative | 639739 - 641124 | 52143.5 |
| asnc family transcriptional regulator | DWZ06_02705 | Not Available | Positive | 641153 - 641629 | 17875.6 |
| dihydrofolate reductase | DWZ06_02710 | Not Available | Negative | 641633 - 642127 | 18865.7 |
| thymidylate synthase | DWZ06_02715 | Not Available | Negative | 642211 - 643005 | 30480.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

