Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_02355 | Not Available | Positive | 553733 - 555232 | 58004.3 |
| chromate transporter | DWZ06_02360 | Not Available | Negative | 555519 - 556091 | 21054.4 |
| chromate transporter | DWZ06_02365 | Not Available | Negative | 556088 - 556636 | 20479.9 |
| hybrid sensor histidine kinase/response regulator | DWZ06_02370 | Not Available | Negative | 556641 - 560657 | 154503.0 |
| phosphoribosylformylglycinamidine synthase | DWZ06_02375 | Not Available | Negative | 560735 - 564439 | 137142.0 |
| lyse family translocator | DWZ06_02380 | Not Available | Positive | 564590 - 565249 | 24319.7 |
| duf4924 family protein | DWZ06_02385 | Not Available | Positive | 565321 - 565863 | 21340.1 |
| dtdp-4-dehydrorhamnose reductase | DWZ06_02390 | Not Available | Positive | 565878 - 566735 | 31996.1 |
| peptide chain release factor 3 | DWZ06_02395 | Not Available | Positive | 566742 - 568310 | 59982.5 |
| molecular chaperone djla | DWZ06_02400 | Not Available | Negative | 568385 - 569167 | 28988.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

