Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_02305 | Not Available | Positive | 541251 - 541844 | 22584.9 |
| cell filamentation protein fic | DWZ06_02310 | Not Available | Positive | 541847 - 542845 | 39541.9 |
| hypothetical protein | DWZ06_02315 | Not Available | Negative | 542813 - 543028 | 7928.93 |
| s-layer protein | DWZ06_02320 | Not Available | Negative | 543194 - 544873 | 64186.7 |
| carbon starvation protein a | DWZ06_02325 | Not Available | Positive | 544952 - 546382 | 52225.5 |
| hypothetical protein | DWZ06_02330 | Not Available | Positive | 546369 - 546590 | 8766.94 |
| hypothetical protein | DWZ06_02335 | Not Available | Positive | 546609 - 547100 | 17873.6 |
| beta-n-acetylhexosaminidase | DWZ06_02340 | Not Available | Negative | 547210 - 549516 | 85868.1 |
| endonuclease/exonuclease/phosphatase family protein | DWZ06_02345 | Not Available | Negative | 549573 - 550604 | 39595.6 |
| excinuclease abc subunit uvra | DWZ06_02350 | Not Available | Negative | 550850 - 553651 | 104844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

