Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20960 | Not Available | Positive | 4904898 - 4905080 | 6873.8 |
| hypothetical protein | DWZ06_20965 | Not Available | Positive | 4905085 - 4905437 | 13773.0 |
| duf2786 domain-containing protein | DWZ06_20970 | Not Available | Positive | 4905494 - 4905769 | 10085.2 |
| hypothetical protein | DWZ06_20975 | Not Available | Positive | 4905903 - 4906242 | 13032.6 |
| hypothetical protein | DWZ06_20980 | Not Available | Positive | 4906295 - 4906771 | 17986.3 |
| peptidase m15 | DWZ06_20985 | Not Available | Positive | 4906863 - 4906969 | 4052.97 |
| fimbrillin family protein | DWZ06_20990 | Not Available | Positive | 4906970 - 4907635 | 23236.5 |
| transposase | DWZ06_20995 | Not Available | Negative | 4907658 - 4908276 | 24239.9 |
| Trna-glu | Not Available | Not Available | Positive | 4909537 - 4909612 | Not Available |
| dde transposase | DWZ06_21015 | Not Available | Negative | 4909935 - 4910384 | 16978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

