Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20850 | Not Available | Positive | 4891159 - 4891401 | 9607.63 |
| dna adenine methylase | DWZ06_20855 | Not Available | Positive | 4891493 - 4891593 | 3987.96 |
| is66 family transposase | DWZ06_20860 | Not Available | Negative | 4891615 - 4893180 | 60470.3 |
| is66 family insertion sequence hypothetical protein | DWZ06_20865 | Not Available | Negative | 4893267 - 4893617 | 13608.7 |
| hypothetical protein | DWZ06_20870 | Not Available | Negative | 4893720 - 4894190 | 17718.5 |
| hypothetical protein | DWZ06_20875 | Not Available | Negative | 4894673 - 4894894 | 8758.57 |
| conjugative transposon protein tram | DWZ06_20880 | Not Available | Positive | 4895522 - 4895650 | 4772.99 |
| hypothetical protein | DWZ06_20885 | Not Available | Positive | 4896058 - 4896417 | 14066.7 |
| hypothetical protein | DWZ06_20890 | Not Available | Positive | 4896419 - 4896604 | 7208.35 |
| hypothetical protein | DWZ06_20895 | Not Available | Positive | 4896652 - 4896861 | 8328.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

