Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20580 | Not Available | Positive | 4839074 - 4839316 | 9651.65 |
| dna adenine methylase | DWZ06_20585 | Not Available | Positive | 4839408 - 4840247 | 32485.8 |
| hypothetical protein | DWZ06_20590 | Not Available | Positive | 4840391 - 4840795 | 14740.9 |
| hypothetical protein | DWZ06_20595 | Not Available | Positive | 4840801 - 4841250 | 16904.8 |
| peptidase m15 | DWZ06_20600 | Not Available | Positive | 4841251 - 4841595 | 13029.4 |
| hypothetical protein | DWZ06_20605 | Not Available | Positive | 4841762 - 4842304 | 20252.3 |
| hypothetical protein | DWZ06_20610 | Not Available | Positive | 4842398 - 4842640 | 9356.28 |
| hypothetical protein | DWZ06_20615 | Not Available | Negative | 4843511 - 4844764 | 48858.8 |
| trna lysidine(34) synthetase tils | DWZ06_20620 | Not Available | Negative | 4845891 - 4847195 | 50064.5 |
| ferrous iron transport protein b | DWZ06_20625 | Not Available | Positive | 4847316 - 4849784 | 92758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

