Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20530 | Not Available | Negative | 4834332 - 4834550 | 8409.15 |
| hypothetical protein | DWZ06_20535 | Not Available | Negative | 4834581 - 4834787 | 7800.2 |
| hypothetical protein | DWZ06_20540 | Not Available | Negative | 4834800 - 4834991 | 7123.68 |
| hypothetical protein | DWZ06_20545 | Not Available | Negative | 4835008 - 4835187 | 6728.84 |
| hypothetical protein | DWZ06_20550 | Not Available | Negative | 4835234 - 4835623 | 15156.2 |
| hypothetical protein | DWZ06_20555 | Not Available | Negative | 4835695 - 4835910 | 8413.26 |
| dna-binding protein | DWZ06_20560 | Not Available | Negative | 4835945 - 4836196 | 9638.41 |
| fimbrillin family protein | DWZ06_20565 | Not Available | Negative | 4836416 - 4837353 | 34968.4 |
| hypothetical protein | DWZ06_20570 | Not Available | Negative | 4837424 - 4837702 | 10759.0 |
| para family protein | DWZ06_20575 | Not Available | Negative | 4837718 - 4838575 | 31584.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

