Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20420 | Not Available | Negative | 4813022 - 4813258 | 8989.6 |
| hypothetical protein | DWZ06_20430 | Not Available | Negative | 4814485 - 4814700 | 8033.03 |
| mobilization protein | DWZ06_20435 | Not Available | Positive | 4814901 - 4815310 | 15621.9 |
| pepsy domain-containing protein | DWZ06_20440 | Not Available | Negative | 4815413 - 4816609 | 45240.4 |
| duf4374 domain-containing protein | DWZ06_20445 | Not Available | Negative | 4816626 - 4818026 | 51077.6 |
| tonb-dependent receptor | DWZ06_20450 | Not Available | Negative | 4818084 - 4820384 | 86528.3 |
| dna-3-methyladenine glycosylase i | DWZ06_20455 | Not Available | Positive | 4820822 - 4821379 | 21590.0 |
| Trna-asn | Not Available | Not Available | Positive | 4821751 - 4821824 | Not Available |
| adenosine kinase | DWZ06_20465 | Not Available | Positive | 4821905 - 4822891 | 35238.9 |
| pdz domain-containing protein | DWZ06_20470 | Not Available | Positive | 4822935 - 4824629 | 63076.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

