Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20270 | Not Available | Positive | 4788319 - 4788540 | 8214.35 |
| hypothetical protein | DWZ06_20275 | Not Available | Positive | 4788558 - 4788779 | 8377.14 |
| hypothetical protein | DWZ06_20280 | Not Available | Positive | 4788810 - 4789349 | 20954.8 |
| hypothetical protein | DWZ06_20285 | Not Available | Positive | 4789361 - 4789606 | 9454.38 |
| duf3127 domain-containing protein | DWZ06_20290 | Not Available | Positive | 4789609 - 4789893 | 10726.8 |
| duf3575 domain-containing protein | DWZ06_20295 | Not Available | Positive | 4789896 - 4790444 | 20604.8 |
| hypothetical protein | DWZ06_20300 | Not Available | Positive | 4790454 - 4792517 | 80353.0 |
| hypothetical protein | DWZ06_20305 | Not Available | Positive | 4792507 - 4793373 | 32298.1 |
| fimbrillin family protein | DWZ06_20310 | Not Available | Positive | 4793410 - 4794357 | 33866.0 |
| fimbrillin family protein | DWZ06_20315 | Not Available | Positive | 4794405 - 4795381 | 36255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

