Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_20060 | Not Available | Negative | 4744641 - 4745042 | 15053.7 |
| hypothetical protein | DWZ06_20065 | Not Available | Negative | 4745032 - 4745376 | 12629.3 |
| hypothetical protein | DWZ06_20070 | Not Available | Negative | 4745387 - 4745680 | 10785.5 |
| hypothetical protein | DWZ06_20075 | Not Available | Negative | 4745740 - 4746132 | 14820.7 |
| hypothetical protein | DWZ06_20080 | Not Available | Negative | 4746151 - 4746657 | 19625.9 |
| hypothetical protein | DWZ06_20085 | Not Available | Negative | 4746669 - 4747139 | 18015.1 |
| hypothetical protein | DWZ06_20090 | Not Available | Negative | 4747790 - 4748056 | 10025.2 |
| hypothetical protein | DWZ06_20095 | Not Available | Negative | 4748143 - 4748643 | 19023.2 |
| nucleoside deaminase | DWZ06_20105 | Not Available | Positive | 4749869 - 4750336 | 16967.2 |
| aminoacyl-histidine dipeptidase | DWZ06_20110 | Not Available | Negative | 4750398 - 4751858 | 53173.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

