Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_19955 | Not Available | Positive | 4722098 - 4722412 | 11618.0 |
| hypothetical protein | DWZ06_19960 | Not Available | Negative | 4722466 - 4723340 | 32602.3 |
| hypothetical protein | DWZ06_19965 | Not Available | Negative | 4723340 - 4724689 | 49705.7 |
| hypothetical protein | DWZ06_19970 | Not Available | Negative | 4724714 - 4725739 | 38712.3 |
| tonb-dependent receptor | DWZ06_19975 | Not Available | Negative | 4725783 - 4728167 | 90093.3 |
| hypothetical protein | DWZ06_19980 | Not Available | Negative | 4729256 - 4729648 | 14830.1 |
| hypothetical protein | DWZ06_19990 | Not Available | Positive | 4730323 - 4730532 | 7823.85 |
| site-specific integrase | DWZ06_19995 | Not Available | Negative | 4730541 - 4731776 | 47337.9 |
| acetylornithine carbamoyltransferase | DWZ06_20000 | Not Available | Negative | 4732047 - 4733012 | 36475.8 |
| glutamate-5-semialdehyde dehydrogenase | DWZ06_20005 | Not Available | Negative | 4733032 - 4734285 | 45523.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

