Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_19750 | Not Available | Positive | 4677220 - 4677432 | 7725.12 |
| hypothetical protein | DWZ06_19755 | Not Available | Negative | 4677424 - 4678599 | 45192.9 |
| Trna-ala | Not Available | Not Available | Positive | 4678733 - 4678806 | Not Available |
| hypothetical protein | DWZ06_19765 | Not Available | Negative | 4679460 - 4679669 | 7947.52 |
| hypothetical protein | DWZ06_19770 | Not Available | Negative | 4679838 - 4680152 | 11444.2 |
| hypothetical protein | DWZ06_19775 | Not Available | Positive | 4680398 - 4680880 | 18372.9 |
| long-chain fatty acid--coa ligase | DWZ06_19780 | Not Available | Positive | 4681092 - 4682756 | 62496.0 |
| hypothetical protein | DWZ06_19785 | Not Available | Negative | 4683040 - 4683291 | 9833.47 |
| glycerate kinase | DWZ06_19790 | Not Available | Positive | 4683564 - 4684703 | 39774.6 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DWZ06_19795 | Not Available | Negative | 4684690 - 4687530 | 105120.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

